Cromwell

Introduction

Tutorials

Quick Introduction
How to Configure Cromwell
Getting started with Google Cloud
Getting started with AWS (beta)
View the Timing Diagrams
Persisting data between restarts
Getting started on HPC Clusters
Server Mode
Configuring the Local backend
Viewing Metadata
Getting started with Containers

Cromwell Basics

Modes
Workflow Language Support
Cromwell Releases
Support

Command Line

Feature Documentation

Call Caching
Labels
Hog Factors

Runtime Attributes

Workflow Options

Overview
Google Cloud

Workflow Optimizations

Optimizations
Task inputs: localization_optional
Volatile Tasks: volatile
CheckpointFiles

Configuration

Scaling / Horizontal Cromwell

Ecosystem

WOMtool

Imports

Sub-Workflows

Execution

Logging

Backends

Overview
Local
Google Cloud
AWS Batch
AWS Batch (beta)
GA4GH TES
HPC
Sun GridEngine
LSF
Slurm
HTCondor

Filesystems

Overview
File Transfer Protocol (FTP)
Google Cloud Storage
HTTP
Data Repository Service

For Developers

How to Build
Architecture
Backend Development
Instrumentation
Integration tests
Security
Contribute to docs
Bitesize Design Docs

Cromwell

Introduction
Edit on GitHub

Welcome to Cromwell

Cromwell is a Workflow Management System geared towards scientific workflows. Cromwell is open sourced under the BSD 3-Clause license.

Jamie, the Cromwell pig

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